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<article article-type="research-article" dtd-version="1.3" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xml:lang="ru"><front><journal-meta><journal-id journal-id-type="publisher-id">phytosanitary</journal-id><journal-title-group><journal-title xml:lang="ru">Фитосанитария. Карантин растений</journal-title><trans-title-group xml:lang="en"><trans-title>Plant Health and Quarantine</trans-title></trans-title-group></journal-title-group><issn pub-type="ppub">2782-327X</issn><publisher><publisher-name></publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.69536/FKR.2020.86.74.001</article-id><article-id custom-type="elpub" pub-id-type="custom">phytosanitary-26</article-id><article-categories><subj-group subj-group-type="heading"><subject>Research Article</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="ru"><subject>НАУЧНЫЕ ИССЛЕДОВАНИЯ</subject></subj-group><subj-group subj-group-type="section-heading" xml:lang="en"><subject>SCIENTIFIC RESEARCH</subject></subj-group></article-categories><title-group><article-title>Идентификация грибов рода Monilinia при фитосанитарной диагностике</article-title><trans-title-group xml:lang="en"><trans-title>Identification of fungi of genus Monilinia during phytosanitary diagnosis</trans-title></trans-title-group></title-group><contrib-group><contrib contrib-type="author" corresp="yes"><name-alternatives><name name-style="eastern" xml:lang="ru"><surname>Шухин</surname><given-names>Д. И.</given-names></name><name name-style="western" xml:lang="en"><surname>Shukhin</surname><given-names>D. I.</given-names></name></name-alternatives><bio xml:lang="ru"><p>младший научный сотрудник лаборатории микологии Испытательного лабораторного центра</p></bio><bio xml:lang="en"><p>Junior Researcher of the Mycology Laboratory of Laboratory Testing Center</p></bio><email xlink:type="simple">dmitriq.shukhin@gmail.com</email><xref ref-type="aff" rid="aff-1"/></contrib></contrib-group><aff-alternatives id="aff-1"><aff xml:lang="ru"><institution>ФГБУ «ВНИИКР»</institution><country>Россия</country></aff><aff xml:lang="en"><institution>FGBU “VNIIKR”</institution><country>Russian Federation</country></aff></aff-alternatives><pub-date pub-type="collection"><year>2020</year></pub-date><pub-date pub-type="epub"><day>02</day><month>06</month><year>2021</year></pub-date><volume>1</volume><issue>2</issue><fpage>33</fpage><lpage>40</lpage><permissions><copyright-statement>Copyright &amp;#x00A9; Шухин Д.И., 2021</copyright-statement><copyright-year>2021</copyright-year><copyright-holder xml:lang="ru">Шухин Д.И.</copyright-holder><copyright-holder xml:lang="en">Shukhin D.I.</copyright-holder><license xml:lang="ru" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>Данная работа распространяется под лицензией Creative Commons Attribution 4.0.</license-p></license><license xml:lang="en" license-type="creative-commons-attribution" xlink:href="https://creativecommons.org/licenses/by/4.0/" xlink:type="simple"><license-p>This work is licensed under a Creative Commons Attribution 4.0 License.</license-p></license></permissions><self-uri xlink:href="https://phytosanitary.vniikr.ru/jour/article/view/26">https://phytosanitary.vniikr.ru/jour/article/view/26</self-uri><abstract><p>В статье приведены традиционные, а также современные методы идентификации возбудителей монилиозов плодовых культур – грибов рода Monilinia, используемые при фитосанитарной диагностике, такие как классическая ПЦР и ПЦР в реальном времени, а также мультиплексная ПЦР. Описан новый метод масс-спектрометрии MALDI-ToF MS, а также методы выявления патогенов при латентной инфекции.</p></abstract><trans-abstract xml:lang="en"><p>The article presents traditional, as well as modern techniques of identification of fruit crop moniliosis – fungi of the genus Monilinia – used in phytosanitary diagnosis, such as conventional PCR, qPCR, and multiplex PCR. The new MALDI-ToF MS mass spectrometry technique is described, as well as techniques of latent pathogen infection detection.</p></trans-abstract><kwd-group xml:lang="ru"><kwd>Монилиоз</kwd><kwd>Monilinia</kwd><kwd>бурая монилиозная гниль</kwd><kwd>идентификация</kwd><kwd>карантинный объект</kwd><kwd>ПЦР</kwd><kwd>MALDI-ToF MS</kwd></kwd-group><kwd-group xml:lang="en"><kwd>Moniliosis</kwd><kwd>Monilinia</kwd><kwd>brown rot</kwd><kwd>identification</kwd><kwd>quarantine object</kwd><kwd>PCR</kwd><kwd>MALDI-ToF MS</kwd></kwd-group></article-meta></front><back><ref-list><title>References</title><ref id="cit1"><label>1</label><citation-alternatives><mixed-citation xml:lang="ru">Афанасьев М.В., Миронова Л.В., Балахонов С.В. MALDI-ToF масс-спектрометрический анализ для идентификации возбудителей чумы, холеры и туляремии // Молекулярная генетика, микробиология и вирусология. – 2015. – № 2. – С. 3–8. – URL: https://cyberleninka.ru/article/n/maldi-tof-mass-spektrometricheskiy-analiz-dlya-identifikatsii-vozbuditeley-chumy-holery-i-tulyaremii/viewer.</mixed-citation><mixed-citation xml:lang="en">Afanasev M.V., Mironova L.V., Balakhonov S.V. MALDI-ToF mass spectrometric analysis for identification of plague, cholera and tularaemia pathogens [MALDI-ToF mass-spektrometricheskij analiz dlya identifikacii vozbuditelej chumy, holery i tulyaremii]. Molekulyarnaya genetika, mikrobiologiya i virusologiya. 2015; 2: 3–8. URL: https://cyberleninka.ru/article/n/maldi-tof-mass-spektrometricheskiy-analiz-dlya-identifikatsii-vozbuditeley-chumy-holery-i-tulyaremii/viewer (in Russian).</mixed-citation></citation-alternatives></ref><ref id="cit2"><label>2</label><citation-alternatives><mixed-citation xml:lang="ru">Дудченко И.П., Копина М.Б. Методические рекомендации по выявлению и идентификации возбудителя бурой монилиозной гнили Monilinia fructicola (Winter) Honey. – М.: ФГБУ «ВНИИКР», 2017. – 52 с.</mixed-citation><mixed-citation xml:lang="en">Dudchenko I.P., Kopina M.B. Methodological recommendations for the detection and identification of brown Monilinia fructicola (Winter) Honey brown rot [Metodicheskie rekomendacii po vyyavleniyu i identifikacii vozbuditelya buroj monilioznoj gnili Monilinia fructicola (Winter) Honey]. М.: FGBU “VNIIKR”, 2017 (in Russian).</mixed-citation></citation-alternatives></ref><ref id="cit3"><label>3</label><citation-alternatives><mixed-citation xml:lang="ru">Côté M.J., Tardif M.C., Meldrum A.J. Identification of Monilinia fructigena, M. fructicola, M. laxa, and Monilia polystroma on inoculated and naturally infected fruit using multiplex PCR // Plant Disease. – 2004. – Vol. 88, No. 11. – P. 1219–1225.</mixed-citation><mixed-citation xml:lang="en">Côté M.J., Tardif M.C., Meldrum A.J. Identification of Monilinia fructigena, M. fructicola, M. laxa, and Monilia polystroma on inoculated and naturally infected fruit using multiplex PCR. Plant Disease. 2004; 88 (11): 1219–1225.</mixed-citation></citation-alternatives></ref><ref id="cit4"><label>4</label><citation-alternatives><mixed-citation xml:lang="ru">Freimoser F.M. et al. Direct identification of Monilinia brown rot fungi on infected fruits by matrix- assisted laser desorption/ionization (MALDI) mass spectrometry // Chemical and Biological Technologies in Agriculture. – 2016. – Vol. 3, No. 1. – P. 7.</mixed-citation><mixed-citation xml:lang="en">Freimoser F.M. et al. Direct identification of Monilinia brown rot fungi on infected fruits by matrix- assisted laser desorption/ionization (MALDI) mass spectrometry. Chemical and Biological Technologies in Agriculture. 2016; 3 (1): 7.</mixed-citation></citation-alternatives></ref><ref id="cit5"><label>5</label><citation-alternatives><mixed-citation xml:lang="ru">Garcia-Benitez C., Melgarejo P. et al. Proficiency of real-time PCR detection of latent Monilinia spp. infection in nectarine flowers and fruit // Phytopathologia Mediterranea. – 2017a. – Vol. 56, No. 2. – Р. 242–250.</mixed-citation><mixed-citation xml:lang="en">Garcia-Benitez C., Melgarejo P. et al. Proficiency of real-time PCR detection of latent Monilinia spp. infection in nectarine flowers and fruit. Phytopathologia Mediterranea. 2017a; 56 (2): 242–250.</mixed-citation></citation-alternatives></ref><ref id="cit6"><label>6</label><citation-alternatives><mixed-citation xml:lang="ru">Garcia-Benitez C., Melgarejo P. et al. Detection of latent Monilinia infections in nectarine flowers and fruit by qPCR // Plant Disease. – 2017b. – No. 101. – Р. 1002–1008.</mixed-citation><mixed-citation xml:lang="en">Garcia-Benitez C., Melgarejo P. et al. Detection of latent Monilinia infections in nectarine flowers and fruit by qPCR. Plant Disease. 2017b; 101: 1002–1008.</mixed-citation></citation-alternatives></ref><ref id="cit7"><label>7</label><citation-alternatives><mixed-citation xml:lang="ru">Guinet C. et al. One-step detection of Monilinia fructicola, M. fructigena, and M. laxa on Prunus and Malus by a Multiplex Real-Time PCR assay // Plant Disease. – 2016. – Vol. 100, No. 12. – P. 2465–2474.</mixed-citation><mixed-citation xml:lang="en">Guinet C. et al. One-step detection of Monilinia fructicola, M. fructigena, and M. laxa on Prunus and Malus by a Multiplex Real-Time PCR assay. Plant Disease. 2016; 100 (12): 2465–2474.</mixed-citation></citation-alternatives></ref><ref id="cit8"><label>8</label><citation-alternatives><mixed-citation xml:lang="ru">Hrustić J. et al. Genus Monilinia on pome and stone fruit species // Pesticidi i fitomedicina. – 2012. – Vol. 27, No. 4. – P. 283–297.</mixed-citation><mixed-citation xml:lang="en">Hrustić J. et al. Genus Monilinia on pome and stone fruit species. Pesticidi i fitomedicina. 2012; 27 (4): 283–297.</mixed-citation></citation-alternatives></ref><ref id="cit9"><label>9</label><citation-alternatives><mixed-citation xml:lang="ru">Ioos R., Frey P. Genomic variation within Monilinia laxa, M. fructigena and M. fructicola, and application to species identification by PCR // European Journal of Plant Pathology. – 2000. – Vol. 106, No. 4. – P. 373–378.</mixed-citation><mixed-citation xml:lang="en">Ioos R., Frey P. Genomic variation within Monilinia laxa, M. fructigena and M. fructicola, and application to species identification by PCR. European Journal of Plant Pathology. 2000; 106 (4): 373–378.</mixed-citation></citation-alternatives></ref><ref id="cit10"><label>10</label><citation-alternatives><mixed-citation xml:lang="ru">Lane C.R. A synoptic key for differentiation of Monilinia fructicola, M. fructigena and M. laxa, based on examination of cultural characters // EPPO Bulletin. – 2002. – Vol. 32, No. 3. – P. 489–493.</mixed-citation><mixed-citation xml:lang="en">Lane C.R. A synoptic key for differentiation of Monilinia fructicola, M. fructigena and M. laxa, based on examination of cultural characters. EPPO Bulletin. 2002; 32 (3): 489–493.</mixed-citation></citation-alternatives></ref><ref id="cit11"><label>11</label><citation-alternatives><mixed-citation xml:lang="ru">Michailides T.J., Morgan D.P. et al. Detection and significance of symptomless latent infection of Monilinia fructicola in California stone fruit (abstr.) // Phytopathology. – 2000. – No. 90. – Р. 48.</mixed-citation><mixed-citation xml:lang="en">Michailides T.J., Morgan D.P. et al. Detection and significance of symptomless latent infection of Monilinia fructicola in California stone fruit (abstr.). Phytopathology. 2000; 90: 48.</mixed-citation></citation-alternatives></ref><ref id="cit12"><label>12</label><citation-alternatives><mixed-citation xml:lang="ru">Van Brouwershaven I.R. et al. A real-time (TaqMan) PCR assay to differentiate Monilinia fructicola from other brown rot fungi of fruit crops // Plant Pathology. – 2010. – Vol. 59, No. 3. – P. 548–555.</mixed-citation><mixed-citation xml:lang="en">Van Brouwershaven I.R. et al. A real-time (TaqMan) PCR assay to differentiate Monilinia fructicola from other brown rot fungi of fruit crops. Plant Pathology. 2010; 59 (3): 548–555.</mixed-citation></citation-alternatives></ref><ref id="cit13"><label>13</label><citation-alternatives><mixed-citation xml:lang="ru">White T.J. et al. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics // PCR protocols: a guide to methods and applications. – 1990. – Vol. 18, No. 1. – P. 315–322.</mixed-citation><mixed-citation xml:lang="en">White T.J. et al. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. PCR protocols: a guide to methods and applications. 1990; 18 (1): 315–322.</mixed-citation></citation-alternatives></ref></ref-list><fn-group><fn fn-type="conflict"><p>The authors declare that there are no conflicts of interest present.</p></fn></fn-group></back></article>
